Trans-meQTLs across different cancer types

In trans-meQTL analyses, we identified 965,050 trans-meQTLs at FDR < 0.05 and |r|>=0.3 in 23 cancer types for users to search or browse.

     

e.g., "BLCA"
e.g., "rs4975682"
e.g., "cg25599786"
e.g., "PDCD6"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Methylation probe
Methylation position (hg19)
Gene symbol
Beta
t-stat
r
p-valule
Display
BLCA rs13090202 chr3:125754505 A/G cg26321609 chr3:123680480 CCDC14 -1.18 -24.97 -0.79 3.8E-82 Box Plot
BLCA rs138357779 chr11:50286678 G/A cg15704280 chr7:45808275 SEPT13 -1.03 -24.16 -0.78 8.75E-79 Box Plot
BLCA rs1411423 chr11:50369683 A/C cg15704280 chr7:45808275 SEPT13 -1.03 -24.58 -0.78 1.61E-80 Box Plot
BLCA rs146090996 chr11:50249334 TTTAAA/T cg15704280 chr7:45808275 SEPT13 -1.03 -24.54 -0.78 2.17E-80 Box Plot
BLCA rs147166458 chr6:66804609 GACTC/G cg15611600 chr13:45563400 KIAA1704;NUFIP1 -1.07 -24.46 -0.78 4.98E-80 Box Plot
BLCA rs147242022 chr16:68722519 TTTTTTGTTTTTG/T cg04657470 chr2:198365150 HSPE1;HSPD1 1.09 25.53 0.79 1.98E-84 Box Plot
BLCA rs1503073 chr3:125759232 G/C cg26321609 chr3:123680480 CCDC14 -1.11 -24.17 -0.78 7.81E-79 Box Plot
BLCA rs1566714 chr3:125731092 C/T cg26321609 chr3:123680480 CCDC14 -1.18 -26.84 -0.81 8.9E-90 Box Plot
BLCA rs1580563 chr11:50388831 T/C cg15704280 chr7:45808275 SEPT13 -1.02 -24.51 -0.78 3.04E-80 Box Plot
BLCA rs1586631 chr11:50393918 C/T cg15704280 chr7:45808275 SEPT13 -1.02 -24.51 -0.78 3.04E-80 Box Plot
BLCA rs1602128 chr11:50389072 G/T cg15704280 chr7:45808275 SEPT13 -1.02 -24.51 -0.78 3.04E-80 Box Plot
BLCA rs1826089 chr11:50411187 C/T cg15704280 chr7:45808275 SEPT13 -1.03 -24.41 -0.78 7.62E-80 Box Plot
BLCA rs1875682 chr3:125726890 C/A cg26321609 chr3:123680480 CCDC14 -1.19 -26.55 -0.81 1.38E-88 Box Plot
BLCA rs1886697 chr16:68716179 T/C cg04657470 chr2:198365150 HSPE1;HSPD1 1.1 25.88 0.8 7.02E-86 Box Plot
BLCA rs1906893 chr11:50393152 C/T cg15704280 chr7:45808275 SEPT13 -1.02 -24.21 -0.78 5.53E-79 Box Plot